domingo, 7 de junio de 2015

Conclusion and Evaluation

Conclusion

It is clearly seen that the amount of time the organ has been dead has a great impact among the DNA it produces. DNA is no longer produced after death, mainly because cells die and cannot keep dividing itselfs. Moreover, there is surprisingly a great amount of DNA extracted, taking into consideration that the organs we used weighed approximately 100 to 125 grams. In week 1 we extracted about 25 grams, which is more or less 25% of the whole mass of the organ. This reveals the big amount of DNA which is present in each organ.
Logically, as time goes on, cells start to decompose and destroy, as a consequence, DNA decomposes with them. We know that DNA is saved in the nucleus in eukaryotic cells, but after cell death, the decomposition begins at the nucleus, and, therefore, in the strands of DNA.
There is a big distinction between DNA produced after the organs being dead in weeks 2 and 3. After this, the decrease of the amount of DNA starts to become lower and lower, probably because there is a larger amount of bacteria which keep the organ surrounded and not affected by climatological changes.
Also, there are less bacteria in the organ in week 1 than in week 5 because they are much less time exposed to the outside world. The bacteria do not just protect the organ and eat it, but also they produce DNA, which can alter our experiment.
This experiment could be used in the future for therapeutic cloning, for example, because with strands of DNA we could create whole new organs which would be very useful to other people.  Furthermore, we could create new proteins and hormones changing the order of nucleotides. This would use a different aminoacid than an expected, so, a new protein.
Some materials have a specific function, for example, parsley is necessary because it softens the solution. Alcohol and dish washer are essential. The dish washer breaks down the molecules of DNA, separating them from the rest of cells. The alcohol being poured slowly down the sides makes a solution which is completely heterogeneous, and, according to a principle in physics, the thing that has more volume, in this case, DNA, will come out and try to mix with the lighter part, the alcohol. This makes us have DNA which can easily be taken out of the beaker now.
The video shows the experiment done, and now it is corrected.

Evaluation

Weak points

  • Possibly we did not extract as much DNA as it was possible, mainly because as we stirred the organ, we were supposed to only use the liquid part, the solid part we did not have to use. Therefore, more DNA which could be found there could be extracted.
  • We stirred the testicles for a longer amount of time than estimated because there was very little liquid and the quantity of DNA would be clearly reduced.
  • In some cases we poured more amount of a certain material than needed, since we saw that perhaps some substances could still be found in the beaker.
  • It is possible that stirring the solution too hard may have affected the molecules of DNA, and consequently, not have produced as much as it should.
  • The main weak point is that we cannot know if the DNA came from the organ which we had or from the bacteria which surrounded it. Due to the fact that DNA is universal for all living beings, DNA from a bacteria is equal to DNA from an animal. Therefore, the bacteria are a variable that we cannot control and that have a very big impact on our experiment.
  • We could not know when the animal had been killed, because the butcher did not know, so the time we give is very relative.

Improvements

  • We should have spent more time trying to make all the substances pass through in order to have a larger amount of liquid.
  • We should have cut the organ several times so that it would be much easier to stir, and avoid the breaking of the molecules.
  • Putting the organ in water an hour before the experiment took place was an improvement that we should have thought about earlier because it would have saved us a lot of time.
  • Making sure that putting the exact amount of liquid to not make any mistakes is a good improvement because it will make our experiment quicker, as there will be a less amount of things to clean.
  • To improve the quantity of DNA, and also to reduce the chances of possible errors, we could have mixed the mixture more gently. Furthermore, the mixture has got to be completely homogeneous, which did not completely be.
  • Comparing our results after having done the complete research would be helpful because we would make sure there were no silly mistakes which could affect our complete experiment.
  • To improve the quality of the experiment, before starting to stir the organs, we could have cleaned them to reduce the amount of bacteria in the organs, and therefore, more “pure” DNA.
  • We could have put in a better way the DNA in the microscope because some parts were thicker than others and it was hard to see through the microscope.

Limitations

  • One of the main problems we had was that the mixer was broken by other students, so we spent two weeks not being able of doing the experiment. However, we met at Pablo’s house and did it there because his mother did not let him bring another mixer to school.
  • We have had less time in some lessons because we had to go and buy the organs, which took a while. In the meantime, the other person prepared the materials.
  • The laboratory was, at times, very crowded and we could not do the experiment correctly because there was not enough amount of space.

 

sábado, 6 de junio de 2015

Results:

Results:

Video of the experiment:


https://lh5.googleusercontent.com/_N-jGlcK_kust1OCdjmaX0Dv0aV1fT9SPBMTTy-7_mLywSKBlXvR7PiXB0GVfImU1SaHDAsPHYJbaGiYOsfklLWA0b-ikgpUeeKJwmUB7Boh-LF0IiNusFRxqthFfdul-gj_QTo

From the first experiment we extracted 23,03 grams of DNA. The testicle of the pig had been dead 10 days ago. After, in the second experiment, 15,55 grams of DNA were extracted from a heart of a pig. It had been dead for 21 days.

For the third trimester we will try to look at the DNA through the microscope.

https://lh6.googleusercontent.com/jIQVqiQukhkDauYg1VOdJXKr90apJluHt1RJWsCSqwlER9FDXbLEjsBoy5ggnyPSiAfjdwSFBwnkuUI4kjiGl6mgKfbUGxFaR4UZ6GRQtoFETlscq-QrdXu3uM4SdqTGe7ahaSU
As we can observe,...

https://lh5.googleusercontent.com/a8DtiR6E0wcKV5ult5G1lQbqGeCybOabCh8rtDQ3VI1FKID8SxAO0oNToj_63VGMPWnyXwZ0xjLUlK5B7vKi9gm-L2rBcMKByfnLXTkl-jjfSs8y_bHlMUvN4xDwYwIdT3AF95E

Table of Results:

1º WEEK
2º WEEK
3º WEEK
4º WEEK
5º WEEK
Amount of DNA extracted from the testicles
25, 07 grams
23, 03 grams
15, 55 grams
11, 35 grams
9, 12 grams